CDS

Accession Number TCMCG007C02584
gbkey CDS
Protein Id XP_009120936.1
Location join(15261560..15261696,15261816..15261873,15261977..15262081,15262285..15262342,15262439..15262614,15262699..15262768,15262845..15263140)
Gene LOC103845801
GeneID 103845801
Organism Brassica rapa

Protein

Length 299aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009122688.3
Definition probable prolyl 4-hydroxylase 4 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category E
Description oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors procollagen-proline 4-dioxygen
KEGG_TC -
KEGG_Module -
KEGG_Reaction R01252        [VIEW IN KEGG]
KEGG_rclass RC00478        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00472        [VIEW IN KEGG]
EC 1.14.11.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00330        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00330        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGATGTCTCGCCGTGGAATGTTATCGTTCTTAGCCATCTTATCCGTCCTGCTTCAATGCACCAATTCCTTAACTAGCTCTCCTACCGCCATTATTAATCCTTCCAAAGTCAAGCAGGTTTCCTCCAAACCCAGGGCGTTTGTATACGAAGGGTTCCTCACGGAATTGGAATGTGATCATATGGTCTCCCTTGCAAAGGCGAGCCTGAAGAGATCTGCTGTGGCTGATAATGATAGTGGAGAGAGCAAATTCAGCGAGGTTCGGACCAGCTCTGGCACCTTTATCCCCAAAGCAAAGGATCCAATTGTTTCCGGTATAGAAGACAAGATCTCCACTTGGACATTTCTTCCTAAAGAAAACGGGGAAGACATGCAGGTATTGAGATACGAGCACGGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACAAAGTCAACATTGTCCGTGGTGGACACCGCATTGCAACAGTTCTCATGTATCTATCCAATGTCACCAGAGGTGGAGAAACCGTCTTCCCCAATGCAGAGATACCTTCTCGCCGAGTACTAATTGAAAACAAAGACGACCTTTCTGATTGTGCCAAGAAAGGAATCGCTGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTCCACCCTGACGCAATCCCTGACCCGTTGAGCCTCCACGGTGGATGTCCAGTGATTGAAGGAGAGAAATGGTCTGCGACCAAGTGGATCCACGTGGACTCGTTCGACAAGATTGTGACACCTGGTGGAAACTGTACTGATATGAACGAGAGCTGTGAGAGATGGGCAGTGCTTGGGGAATGCACAAAGAACCCAGAGTACATGGTTGGTACTGCTGAGCTTCCTGGCTATTGCAGGCGCAGCTGTAAGGCTTGTTAG
Protein:  
MSMSRRGMLSFLAILSVLLQCTNSLTSSPTAIINPSKVKQVSSKPRAFVYEGFLTELECDHMVSLAKASLKRSAVADNDSGESKFSEVRTSSGTFIPKAKDPIVSGIEDKISTWTFLPKENGEDMQVLRYEHGQKYDAHFDYFHDKVNIVRGGHRIATVLMYLSNVTRGGETVFPNAEIPSRRVLIENKDDLSDCAKKGIAVKPRKGDALLFFNLHPDAIPDPLSLHGGCPVIEGEKWSATKWIHVDSFDKIVTPGGNCTDMNESCERWAVLGECTKNPEYMVGTAELPGYCRRSCKAC